The Eukaryotic Promoter Database (EPD): recent developments.

Details

Ressource 1Download: serval:BIB_12438.P001 (140.78 [Ko])
State: Public
Version: author
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It was possible to publish this article open access thanks to a Swiss National Licence with the publisher.
Serval ID
serval:BIB_12438
Type
Article: article from journal or magazin.
Collection
Publications
Institution
Title
The Eukaryotic Promoter Database (EPD): recent developments.
Journal
Nucleic Acids Research
Author(s)
Périer R.C., Junier T., Bonnard C., Bucher P.
ISSN
0305-1048
Publication state
Published
Issued date
1999
Volume
27
Number
1
Pages
307-309
Language
english
Notes
Publication types: Journal Article
Abstract
The Eukaryotic Promoter Database (EPD) is an annotated non-redundant collection of eukaryotic POL II promoters, for which the transcription start site has been determined experimentally. Access to promoter sequences is provided by pointers to positions in nucleotide sequence entries. The annotation part of an entry includes description of the initiation site mapping data, cross-references to other databases, and bibliographic references. EPD is structured in a way that facilitates dynamic extraction of biologically meaningful promoter subsets for comparative sequence analysis. Recent efforts have focused on exhaustive cross-referencing to the EMBL nucleotide sequence database, and on the improvement of the WWW-based user interfaces and data retrieval mechanisms. EPD can be accessed at http://www.epd.isb-sib.ch
Keywords
Algorithms, Animals, Base Sequence, Databases, Factual, Eukaryotic Cells, Genes, Viral/genetics, Genome, Information Storage and Retrieval, Internet, Promoter Regions, Genetic/genetics, RNA Polymerase II/physiology, RNA, Messenger/genetics, Sequence Homology, Nucleic Acid, Transcription, Genetic/genetics, User-Computer Interface
Pubmed
Web of science
Open Access
Yes
Create date
19/11/2007 12:03
Last modification date
25/09/2019 6:08
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